Journal of Andrology Proceedings of the Fifth International Conference on the Epididymis
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Table 2. Prevalence of the SNPs in TNP2 in infertile or proven-fertile populations*
  Position
    Number of SNPs (%)
  Reference (NCBI dbSNP rs no.)
  Nucleotide   Amino Acid   Genotype   Infertile   Proven Fertile

  129   28 (R)   C/C   281 (99.6)   265 (99.6)  
    (R/C)   C/T   1 (0.4)   1 (0.4)  
  188   47 (Q)   G/G   278 (98.6)   264 (99.2)  
    (G/H)   G/C   4 (1.4)   2 (0.8)  
  246   67 (G)   G/G   282 (100)   265 (99.6)  
    (G/S)   G/A   0 (0)   1 (0.4)  
  357   104 (K)   A/A   282 (100)   265 (99.6)  
    (K/Q)   A/C   0 (0)   1 (0.4)  
  518   131 (R)   C/C   178 (66.3)   109 (41.0)  
    (R/W)   C/T   86 (30.5)   132 (49.6)   rs11640138
    (W/W)   T/T   9 (3.2)   25 (9.4)  
  613     G/G     72 (100)  
      G/A     0 (0)   rs181695
      ND   282   194  
  721     C/G     72 (100)  
      G/T     0 (0)   rs2857758
      ND   282   194  
      G/G     73 (100)  
  816     g/t     0 (0)   rs11640282
      ND   282   193  
  946     A/A   282 (100)   263 (100)  
      T/A   0 (0)   0 (0)   rs3867172
  947     T/T   282 (100)   263 (100)  
      T/A   0 (0)   0 (0)   rs3884056
  950     G/G   282 (100)   263 (100)  
      G/C   0 (0)   0 (0)   rs3867171
  1019     T/T   281 (99.6)   266 (100)  
      T/A   1 (0.4)   0 (0)  
  1036     G   282 (100)   266 (100)  
      Deletion   0 (0)   0 (0)   L03378 (GenBank)
  1046     G   282 (100)   266 (100)  
      Deletion   0 (0)   0 (0)   L03378 (GenBank)
      G/G   186 (66.0)   110 (41.4)  
  1272     G/C   86 (30.5)   131 (49.2)   rs8043625
      C/C   10 (3.5)   25 (9.4)  

  *The numbers (%) of SNPs in the infertile and proven-fertile men are shown in association with data on the genyotypes and genomic positions. The bold SNPs are registered in the database, but were not found in this study. TNP2 indicates transition nuclear protein gene 2; ND, not determined.





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